15N Tracing Analyzer
A focused tool for researchers analyzing 15N tracer data to quantify enrichment and fluxes in metabolic studies in labs.
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About This Tool
Conceptually, it parses a tabular dataset, applies natural abundance correction on 15N signals, converts to fractional enrichment, and aggregates results by metabolite and time point. When a network of metabolites is provided via inputs or assumed, it estimates fluxes using a simple mass-balance model and least-squares minimization; uncertainty can be approximated via bootstrap resampling.
Core features include data ingestion; 15N correction; fractional enrichment calculation; optional flux estimation; exportable results; and support for multiple timepoints. The tool uses standard isotopic definitions and SI units, enabling cross-lab use and reproducible documentation.
Use cases include tracking label incorporation over time, comparing conditions, and validating pathway activity. It differentiates by offering an integrated correction and minimal modeling pipeline suitable for publication-ready figures and reproducible analyses.
How to Use
- Provide inputs: upload data CSV with required columns (sample_id, metabolite, time, enrichment_15N) and optional correction factors.
- Choose analysis_method: isotopomer or mass-balance (default).
- Run calculation: execute workflow to produce corrected enrichment and flux estimates.
- Review outputs: inspect per-metabolite enrichment, time trends, and summary statistics.
- Export results: download CSV/JSON and, if enabled, bootstrap uncertainty.
Frequently Asked Questions
Find Quick Answers
What inputs are required for analysis?
Does it correct for natural abundance?
What flux estimation methods are supported?
Can it handle multi-metabolite networks?
Need to run multiple calculations?
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