Pooling Calculator

An easy-to-use online tool to calculate optimal sample pools for Illumina sequencing, helping labs save costs and improve efficiency.

Illustration of a DNA pooling processA modern flat design SVG showing interconnected DNA sample tubes and sequencing pools, symbolizing pooling calculations for Illumina sequencing.

Check It Yourself

About This Tool

This pooling calculator is designed for genomic researchers and biotech professionals who perform Illumina sequencing. By inputting parameters such as the total number of samples, preferred sequencing platform, desired coverage depth, and multiplexing limits, users receive optimized pooling strategies that improve resource allocation. The tool simplifies complex calculations involved in sequencing pool design, factoring in platform-specific characteristics and constraints. It supports quick decision-making, cost estimation, and planning for large-scale genomic projects. Advanced options include accounting for DNA fragment sizes and index hopping risks, giving researchers detailed insights into their sequencing setups and efficiencies. Whether managing small or large sample cohorts, this calculator ensures precise, effective pooling—saving time, reducing costs, and increasing data quality.

How to Use

1. Enter total number of samples to sequence.
2. Select your Illumina platform from the dropdown menu.
3. Input desired coverage depth per sample.
4. Specify the multiplexing limit per run.
5. Optional: Adjust DNA fragment size if relevant.
6. Click the 'Calculate' button to view optimized pooling details.

FAQs/Additional Resources

Find Quick Answers

What is sample pooling in Illumina sequencing?

How does this calculator optimize pooling strategies?

Can I customize parameters for different DNA fragment sizes?

Does the calculator estimate sequencing costs?

Is this tool suitable for small-scale or large-scale projects?

User Reviews

See What Others Are Saying

John Doe

John Doe

CEO of Company

Lorem ipsum dolor sit amet, consectetur adipiscing elit, sed do eiusmod tempor incididunt ut labore et dolore magna aliqua.

John Doe

John Doe

CEO of Company

Lorem ipsum dolor sit amet, consectetur adipiscing elit, sed do eiusmod tempor incididunt ut labore et dolore magna aliqua.

John Doe

John Doe

CEO of Company

Lorem ipsum dolor sit amet, consectetur adipiscing elit, sed do eiusmod tempor incididunt ut labore et dolore magna aliqua.

John Doe

John Doe

CEO of Company

Lorem ipsum dolor sit amet, consectetur adipiscing elit, sed do eiusmod tempor incididunt ut labore et dolore magna aliqua.

John Doe

John Doe

CEO of Company

Lorem ipsum dolor sit amet, consectetur adipiscing elit, sed do eiusmod tempor incididunt ut labore et dolore magna aliqua.

John Doe

John Doe

CEO of Company

Lorem ipsum dolor sit amet, consectetur adipiscing elit, sed do eiusmod tempor incididunt ut labore et dolore magna aliqua.

John Doe

John Doe

CEO of Company

Lorem ipsum dolor sit amet, consectetur adipiscing elit, sed do eiusmod tempor incididunt ut labore et dolore magna aliqua.

John Doe

John Doe

CEO of Company

Lorem ipsum dolor sit amet, consectetur adipiscing elit, sed do eiusmod tempor incididunt ut labore et dolore magna aliqua.

John Doe

John Doe

CEO of Company

Lorem ipsum dolor sit amet, consectetur adipiscing elit, sed do eiusmod tempor incididunt ut labore et dolore magna aliqua.

Explore Related Tools

More Solutions for Your Needs

Kyoto Taxi Fare Calculator IconFlat design SVG representing a taxi with Yen symbol and map pin for Kyoto trip estimation¥

Kyoto Taxi Fare Calculator

Quickly estimate Kyoto taxi fares with our free online tool, perfect for travelers, residents, and taxi operators needing accurate fare calculations.

KX Calculator IllustrationA minimalistic flat design icon representing a calculator with scientific symbols, centered and prominent, using high-contrast colors, with a transparent background.KX

Kx Calculator

Accurately calculate the Kx parameter for scientific and engineering applications with this free online tool, suitable for researchers and students.

SVG representation of a calculator with Y and KX parametersDetailed minimalist icon depicting mathematical calculation components with abstract Y and KX labelsYKX

Y KX Calculator

Quickly compute Y values from KX inputs with our free online calculator, ideal for engineers, scientists, and students needing precise mathematical results.

F KX Calculator

An easy-to-use free online tool for performing Fourier analysis, calculating coefficients, and visualizing frequency spectra for signals and data.

Your Feedback Matters

Help Us to Improve